MicroFootPrinter -- a tool for phylogenetic footprinting in prokaryotic genomes
What you can do:
Identify motifs that are well conserved across the cis-regulatory regions of these homologous genes in microorganisms.
Highlights:
- Phylogenetic footprinting is a method for the discovery of regulatory elements in a set of homologous regulatory regions, usually collected from multiple species.
- It does so by identifying the most conserved motifs in those homologous regions.
Keywords:
- phylogenetic footprinting tool
- microorganism transcription factor binding site analysis tool
- bacterial DNA-binding sites prediction tool
- prokaryotic promoter analysis tool
- transcription starting site prediction tool
- transcription factor binding sites
- transcription factors
- prokaryotic cis-elements
- cis-elements prediction tool
- microbial regulatory element prediction tool
- promoter element prediction tool
Literature & Tutorials:
This record last updated: 07-26-2006