RNAhybrid -- microRNA target prediction easy, fast and flexible

URL:
http://bibiserv.techfak.uni-bielefeld.de/rnahybrid/
What you can do:
Predict multiple potential binding sites of miRNAs in large target RNAs.
Highlights:
  • RNAhybrid is a tool for finding the minimum free energy hybridization of a long and a short RNA, and thus effectively predict microRNA (miRNA) targets.
  • The 2006 release disallows G:U base pairs in the seed region, and a seed-match speed-up, which accelerates the program by a factor of 8.
Keywords:
  • microRNAs (miRNA) target prediction tool
  • RNA interference
Literature & Tutorials:
PubMed Link: RNAhybrid -- microRNA target prediction easy, fast and flexible
PubMed Link of the original article: Fast and effective prediction of microRNA/target duplexes
This record last updated: 07-27-2006
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