SNP-RFLPing -- restriction enzyme mining for SNPs in genomes
What you can do:
Find suitable restriction enzymes for assays on a batch of SNPs and genes from the human, rat, and mouse genomes.
Highlights:
- The SNP-RFLPing analysis provides the SNP contig position, heterozygosity, function, protein residue, and amino acid position for cSNPs as well as commercial and noncommercial restriction enzymes.
- All SNPs with available RFLP restriction enzymes of each input genes are provided even if many SNPs exist.
- The software takes three user-friendly inputs: 1) NCBI dbSNP "rs" or "ss" IDs; 2) NCBI Entrez gene ID and HUGO gene name; 3) any formats of SNP-in-sequence, and are allowed to perform the SNP-RFLPing assay.
Keywords:
- restriction fragment length polymorphism RFLPs
- RFLP assay
- Single Nucleotide Polymorphisms
- SNPs
- SNP genotyping
- restriction enzymes
- restriction analysis
Literature & Tutorials:
This record last updated: 12-04-2006