COMPASS server for remote homology inference
What you can do:
Construct local alignments and detect homology based on the comparison of multiple sequence alignments
Highlights:
- COMPASS is a profile-based method for the detection of remote sequence similarity and the prediction of protein structure.
- The server features three major developments: (i) improved statistical accuracy; (ii) increased speed from parallel implementation; and (iii) new functional features facilitating structure prediction.
- These features include visualization tools that allow the user to quickly and effectively analyze specific local structural region predictions suggested by COMPASS alignments.
Keywords:
- sequence alignment
- sequence homology
- MSA
- Multiple sequence alignment
- protein structure-functional prediction
Literature & Tutorials:
This record last updated: 09-10-2009