4DXpress -- expression database in four dimensions
What you can do:
A database for cross-species expression pattern comparisons.
Highlights:
- We have integrated expression patterns for zebrafish, Drosophila, medaka and mouse into a central public repository called 4DXpress.
- Users can query anatomy ontology-based expression annotations across species and quickly jump from one gene to the orthologues in other species.
- Genes are linked to public microarray data in ArrayExpress.
- We have mapped developmental stages between the species to be able to compare developmental time phases.
- We store the largest collection of gene expression patterns available to date in an individual resource, reflecting 16 505 annotated genes.
- 4DXpress will be an invaluable tool for developmental as well as for computational biologists interested in gene regulation and evolution.
Keywords:
- Drosophila
- Gene Expression
- Gene Expression Profiling
- Gene Expression Regulation
- Medaka
- Mice
- Oligonucleotide Array Sequence Analysis
- Oryzias
- Systems Integration
- Zebrafish
Literature & Tutorials:
This record last updated: 04-15-2008