OPTIC -- orthologous and paralogous transcripts in clades

What you can do:
Browse complete genomes in several clades.
  • OPTIC database currently provides sets of gene predictions and orthology assignments for three clades: (i) amniotes, including human, dog, mouse, opossum, platypus and chicken (17 443 orthologous groups); (ii) a Drosophila clade of 12 species (12 889 orthologous groups) and (iii) a nematode clade of four species (13 626 orthologous groups).
  • Gene predictions, multiple alignments and phylogenetic trees are freely available to browse and download.
  • Caenorhabditis
  • Dogs
  • Drosophila
  • Gene Duplication
  • Genes
  • Genomics
  • Humans
  • Mice
  • Phylogeny
  • Sequence Alignment
  • clade
  • clades
  • orthologous
  • paralogous
  • paralog
  • ortholog
Literature & Tutorials:
This record last updated: 05-02-2008
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