OPTIC -- orthologous and paralogous transcripts in clades
What you can do:
Browse complete genomes in several clades.
Highlights:
- OPTIC database currently provides sets of gene predictions and orthology assignments for three clades: (i) amniotes, including human, dog, mouse, opossum, platypus and chicken (17 443 orthologous groups); (ii) a Drosophila clade of 12 species (12 889 orthologous groups) and (iii) a nematode clade of four species (13 626 orthologous groups).
- Gene predictions, multiple alignments and phylogenetic trees are freely available to browse and download.
Keywords:
- Caenorhabditis
- Dogs
- Drosophila
- Gene Duplication
- Genes
- Genomics
- Humans
- Mice
- Phylogeny
- Sequence Alignment
- clade
- clades
- orthologous
- paralogous
- paralog
- ortholog
Literature & Tutorials:
This record last updated: 05-02-2008