INFO-RNA -- A Server for Inverse Folding of RNA
What you can do:
Design RNA sequences that fold into a given pseudo-knot free RNA secondary structure.
Highlights:
- INFO-RNA is a new web server for designing RNA sequences that fold into a user given secondary structure.
- Furthermore, constraints on the sequence can be specified, e.g. one can restrict sequence positions to a fixed nucleotide or to a set of nucleotides.
- Moreover, the user can allow violations of the constraints at some positions, which can be advantageous in complicated cases.
- The INFO-RNA web server allows biologists to design RNA sequences in an automatic manner.
- It is clearly and intuitively arranged and easy to use.
- The procedure is fast, as most applications are completed within seconds and it proceeds better and faster than other existing tools.
Keywords:
- Nucleic Acid Conformation
- RNA
- Sequence Alignment
- Sequence Analysis
- RNA secondary structure
- RNA sequences
- inverse folding
- folding
Literature & Tutorials:
This record last updated: 06-04-2008