RNAz -- prediction of thermodynamically stable and evolutionarily conserved RNA structures

What you can do:
Detect thermodynamically stable and evolutionarily conserved RNA secondary structures in multiple sequence alignments.
Highlights:
  • We present a web server that uses the RNAz algorithm to detect functional RNA structures in multiple alignments of nucleotide sequences.
  • The server provides access to a complete and fully automatic analysis pipeline that allows not only to analyze single alignments in a variety of formats, but also to conduct complex screens of large genomic regions.
  • Results are presented on a website that is illustrated by various structure representations and can be downloaded for local view.
Keywords:
  • Conserved Sequence
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • RNA Regulatory Sequences
  • Sequence Alignment
  • Sequence Analysis
  • Thermodynamics
  • RNA secondary structure
  • RNA
  • RNA structure
  • multiple alignment
  • nucleotide sequence
This record last updated: 01-05-2021
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