MYBS -- Mining Yeast Binding Sites
What you can do:
A comprehensive web server for mining transcription factor binding sites in yeast.
Highlights:
- MYBS (Mining Yeast Binding Sites) is a comprehensive web server that integrates an array of both experimentally verified and predicted position weight matrixes (PWMs) from eleven databases, including 481 binding motif consensus sequences and 71 PWMs that correspond to 183 TFs.
- MYBS users can search within this platform for motif occurrences (possible binding sites) in the promoters of genes of interest via simple motif or gene queries in conjunction with the above two filters.
- In addition, MYBS enables users to visualize in parallel the potential regulators for a given set of genes, a feature useful for finding potential regulatory associations between TFs.
- MYBS also allows users to identify target gene sets of each TF pair, which could be used as a starting point for further explorations of TF combinatorial regulation.
Keywords:
- Base Sequence
- Binding Sites
- Gene Targeting
- Molecular Sequence Data
- Oligonucleotide Array Sequence Analysis
- Protein Binding
- Sequence Alignment
- Sequence Analysis
- Transcription Factors
- yeast
- Saccharomyces cerevisiae
- combinatorial regulation
Literature & Tutorials:
This record last updated: 06-04-2008