ISACGH -- InSilicoArray CGH

What you can do:
A web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.
Highlights:
  • ISACGH is a web-based system that combines genomic data with gene expression values and provides different options for functional profiling of the regions found.
  • Several visualization options offer a convenient representation of the results.
  • Different efficient methods for accurate estimation of genomic copy number from array-CGH hybridization data have been included in the program.
  • Moreover, the connection to the gene expression analysis package GEPAS allows the use of different facilities for data pre-processing and analysis.
  • A DAS server allows exporting the results to the Ensembl viewer where contextual genomic information can be obtained.
Keywords:
  • Cluster Analysis
  • Gene Expression Profiling
  • Nucleic Acid Hybridization
  • Oligonucleotide Array Sequence Analysis
  • Systems Integration
  • array CGH
  • gene expression
  • functional profiling
This record last updated: 06-05-2008

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