Nuc-PLoc -- Predicting protein subnuclear localization
What you can do:
A new web-server for predicting protein subnuclear localization by fusing PseAA composition and PsePSSM.
Highlights:
- Nuc-PLoc can be used to identify nuclear proteins among the following nine subnuclear locations: (1) chromatin, (2) heterochromatin, (3) nuclear envelope, (4) nuclear matrix, (5) nuclear pore complex, (6) nuclear speckle, (7) nucleolus, (8) nucleoplasm and (9) nuclear promyelocytic leukaemia (PML) body.
- Nuc-PLoc is featured by an ensemble classifier formed by fusing the evolution information of a protein and its pseudo-amino acid composition.
- The overall jackknife cross-validation accuracy obtained by Nuc-PLoc is significantly higher than those by the existing methods on the same benchmark data set through the same testing procedure.
Keywords:
- protein subnuclear localization
- protein localization predicition
- protein transport
Literature & Tutorials:
This record last updated: 08-05-2008