Maviant -- multi-purpose alignment viewing and annotation tool

URL:
http://snp.agrsci.dk/maviant
What you can do:
Provides DNA chromatogram and alignment views, facilitates evaluation of predictions and supports direct manual annotation.
Highlights:
  • A fast and cost-efficient approach to identify large numbers of novel candidates is the SNP mining of large scale sequencing projects.
  • The increasing availability of sequence trace data in public repositories makes it feasible to evaluate SNP predictions on the DNA chromatogram level.
  • Predicted SNPs and annotations are stored in a web-based database.
  • Using MAVIANT, SNPs can visually be verified based on the DNA sequencing traces.
Keywords:
  • SNP mining
  • single nucleotide polymorphism
  • SNP predictions
  • DNA chromatogram
  • alignment tool
Literature & Tutorials:
PubMed Link: SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation
This record last updated: 08-06-2008
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