M@IA -- a microarray integrated application
What you can do:
A modular open-source application for microarray workflow and integrative datamining.
Highlights:
- M@IA is an environment for DNA microarray data analysis allowing gene network reconstruction and a microarray integrated application which includes all of the steps of a microarray study, from MIAME-compliant raw data storage and processing gene expression analysis.
- Furthermore, M@IA allows automatic gene annotation based on ontology, metabolic/signalling pathways, protein interaction, miRNA and transcriptional factor associations, as well as integrative analysis of gene interaction networks.
- Statistical and graphical methods facilitate analysis, yielding new hypotheses on gene expression data.
- M@IA is a new application for microarray management and data analysis, offering functional insights into microarray data by the combination of gene expression data and biological knowledge annotation based on interactive graphs
Keywords:
- Gene Expression Profiling
- Gene Expression Regulation
- Oligonucleotide Array Sequence Analysis
- microarray
- MIAME
- gene annotation
Literature & Tutorials:
This record last updated: 08-13-2008