ZOOM! -- Zillions Of Oligos Mapped

What you can do:
Designed to map millions of short reads, emerged by next-generation sequencing technology, back to the reference genomes, and carry out post-analysis.
Highlights:
  • We present a framework for how full sensitivity mapping can be done in the most efficient way, via spaced seeds.
  • Using the framework, we have developed software called ZOOM, which is able to map the Illumina/Solexa reads of 15X coverage of a human genome to the reference human genome in one CPU-day, allowing two mismatches, at full sensitivity.
Keywords:
  • genome mapping
  • oligo mapping
  • sequencing
Literature & Tutorials:
This record last updated: 08-15-2008

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