Strainer -- a multi-platform visualization tool for metagenomics data

URL:

http://bioinformatics.org/strainer

What you can do:

Software for analysis of population variation in community genomic datasets.

Highlights:

Sequencing reads can be clustered by matching patterns of single nucleotide polymorphisms to generate predicted gene and protein variant sequences, identify conserved intergenic regulatory sequences, and determine the quantity and distribution of recombination events.
The program reveals the degree of clustering among closely related sequence variants and provides a rapid means to generate gene and protein sequences for functional, ecological, and evolutionary analyses.

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This record last updated: 09-12-2008