GEOmetadb -- GEO Microarray Search Tool

URL:
http://gbnci.abcc.ncifcrf.gov/geo/
What you can do:
A powerful alternative search engine for the Gene Expression Omnibus.
Highlights:
  • All GEO metadata records as well as the relationships between them are parsed and stored in a local MySQL database.
  • A powerful, flexible web search interface with several convenient utilities provides query capabilities not available via NCBI tools.
  • In addition, a Bioconductor package, GEOmetadb that utilizes a SQLite export of the entire GEOmetadb database is also available, rendering the entire GEO database accessible with full power of SQL-based queries from within R.
Keywords:
  • GEO
  • gene expression omnibus
Literature & Tutorials:
PubMed Link: GEOmetadb: powerful alternative search engine for the Gene Expression Omnibus
This record last updated: 11-26-2008
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