CGHweb -- a tool for comparing DNA copy number segmentations from multiple algorithms

What you can do:
A web-based tool that applies a number of popular algorithms to a single array CGH profile entered by the user.
Highlights:
  • CGHweb generates a heatmap panel of the segmented profiles for each method as well as a consensus profile.
  • The clickable heatmap can be moved along the chromosome and zoomed in or out.
  • It also displays the time that each algorithm took and provides numerical values of the segmented profiles for download.
  • The web interface calls algorithms written in the statistical language R.
Keywords:
  • Molecular Sequence Data
  • CGH
  • DNA copy number
This record last updated: 12-16-2008

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