RiceGeneThresher -- bioinformatics tool site for rice genes discovery
What you can do:
A web-based application for mining genes underlying QTL in rice genome.
Highlights:
- RiceGeneThresher is a compendium of rice genomic resources consisting of genetic markers, genome annotation, expressed sequence tags (ESTs), protein domains, gene ontology, plant stress-responsive genes, metabolic pathways and prediction of protein-protein interactions.
- RiceGeneThresher system integrates these diverse data sources and provides powerful web-based applications, and flexible tools for delivering customized set of biological data on rice.
- Its system supports whole-genome gene mining for QTL by querying using DNA marker intervals or genomic loci.
- RiceGeneThresher provides biologically supported evidences that are essential for targeting groups or networks of genes involved in controlling traits underlying QTL.
- Users can use it to discover and to assign the most promising candidate genes in preparation for the further gene function validation analysis.
Keywords:
- rice
- oryza
- QTL
- quantitative trait loci
Literature & Tutorials:
This record last updated: 01-05-2009