VarySysDB -- a human genetic polymorphism database based on all H-InvDB transcripts
What you can do:
A database on genetic polymorphism.
Highlights:
- VarySysDB is a genetic polymorphism database based on 187,156 extensively annotated matured mRNA transcripts from 36,073 loci provided by H-InvDB, that provides a research resource regarding the effects of human genetic polymorphism on various transcripts.
- VarySysDB offers information encompassing published human genetic polymorphisms for each of these transcripts separately, which allows comparisons of effects derived from a polymorphism on different transcripts.
- The information includes single nucleotide polymorphisms and deletion-insertion polymorphisms from dbSNP, copy number variations from Database of Genomic Variants, short tandem repeats and single amino acid repeats from H-InvDB and linkage disequilibrium regions from D-HaploDB.
- The information can be searched and retrieved by features, functions and effects of polymorphisms, as well as by keywords.
- VarySysDB combines two kinds of viewers, GBrowse and Sequence View, to facilitate understanding of the positional relationship among polymorphisms, genome, transcripts, loci and functional domains.
Keywords:
- polymorphism
- genetic variation
Literature & Tutorials:
This record last updated: 08-13-2009