GtRNAdb -- Genomic tRNA Database

URL:
http://gtrnadb.ucsc.edu/
What you can do:
Find information about computationally identified transfer RNA genes.
Highlights:
  • Genomic tRNA Database (GtRNAdb) was created to organize the rapidly growing collection and enable systematic analyses.
  • It currently includes over 74,000 tRNA genes predicted from 740 species.
  • The web resource provides overview statistics of tRNA genes within each analyzed genome, including information by isotype and genetic locus, easily downloadable primary sequences, graphical secondary structures and multiple sequence alignments.
  • Direct links for each gene to UCSC eukaryotic and microbial genome browsers provide graphical display of tRNA genes in the context of all other local genetic information.
  • The database can be searched by primary sequence similarity, tRNA characteristics or phylogenetic group.
Keywords:
  • tRNA
  • genomic tRNA
  • transfer RNA
  • non-protein coding RNA
Literature & Tutorials:
PubMed Link: GtRNAdb: a database of transfer RNA genes detected in genomic sequence
This record last updated: 04-22-2009
Report a missing or misdirected URL.

The Health Sciences Library System supports the Health Sciences at the University of Pittsburgh.

© 1996 - 2023 Health Sciences Library System, University of Pittsburgh. All rights reserved.