Ingeneue -- Gene network simulation software

What you can do:
Synthesize molecular genetic data into models of genetic networks.
Highlights:
  • Ingeneue is a software program written in Java that lets the user quickly turn a map of a genetic network into a dynamical model consisting of a set of ordinary differential equations.
  • Ingeneue was developed as part of an ongoing effort to explore the design and evolvability of genetic networks.
  • It automates instantiation of the same network model in each cell in a 2-D sheet of cells.
  • It constructs model equations from pre-made building blocks corresponding to common biochemical processes.
  • It automates searches through parameter space, sensitivity analyses, and other common tasks.
Keywords:
  • genetic network
  • gene-gene interaction
  • gene network
This record last updated: 08-25-2009
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