Orphelia -- metagenomic ORF finding tool
What you can do:
Predict protein coding genes in short, environmental DNA sequences.
Highlights:
- Orphelia is a program for predicting genes in short DNA sequences produced from Metagenomic sequencing projects.
- It uses prediction models that were created with machine learning techniques on the basis of a wide range of annotated genomes.
- In contrast to other methods for metagenomic gene prediction, Orphelia has fragment length-specific prediction models for the two most popular sequencing techniques in metagenomics, chain termination sequencing and pyrosequencing.
Keywords:
- Metagenomic sequencing
- protein coding
- gene prediction
- open reading frames
- neural network
Literature & Tutorials:
This record last updated: 09-10-2009