Orphelia -- metagenomic ORF finding tool

What you can do:
Predict protein coding genes in short, environmental DNA sequences.
Highlights:
  • Orphelia is a program for predicting genes in short DNA sequences produced from Metagenomic sequencing projects.
  • It uses prediction models that were created with machine learning techniques on the basis of a wide range of annotated genomes.
  • In contrast to other methods for metagenomic gene prediction, Orphelia has fragment length-specific prediction models for the two most popular sequencing techniques in metagenomics, chain termination sequencing and pyrosequencing.
Keywords:
  • Metagenomic sequencing
  • protein coding
  • gene prediction
  • open reading frames
  • neural network
Literature & Tutorials:
This record last updated: 09-10-2009
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