PMRD -- Plant MicroRna Database
What you can do:
Find information about microRNAs in plants.
Highlights:
- The plant miRNA database (PMRD) integrates available plant miRNA data deposited in public databases, gleaned from the recent literature, and data generated in-house. This database contains sequence information, secondary structure, target genes, expression profiles and a genome browser.
- In total, there are 8433 miRNAs collected from 121 plant species in PMRD, including model plants and major crops such as Arabidopsis, rice, wheat, soybean, maize, sorghum, barley, etc.
- For Arabidopsis, rice, poplar, soybean, cotton, medicago and maize, we included the possible target genes for each miRNA with a predicted interaction site in the database. miRNA expression profiles are provided in the PMRD, including the local rice oxidative stress related microarray data (LC Sciences miRPlants_10.1) and the microarray data for poplar, Arabidopsis, tomato, maize and rice.
- The PMRD database was constructed by open source technology utilizing a user-friendly web interface, and multiple search tools.
Keywords:
- plant
- microRNA
- Arabidopsis thaliana
- tomato
- poplar
- maize
- rice
- soybean
- cotton
- medicago
- sorghum
- barley
Literature & Tutorials:
PubMed Link: PMRD: plant microRNA database
This record last updated: 11-03-2009