ConFunc -- Conserved residue Protein Function Prediction Server
What you can do:
Predict protein function using Gene Ontology.
Highlights:
- ConFunc is an automated Gene Ontology (GO)-based protein function prediction approach, which uses conserved residues to generate sequence profiles to infer function.
- ConFunc splits sets of sequences identified by PSI-BLAST into sub-alignments according to their GO annotations.
- Conserved residues are identified for each GO term sub-alignment for which a position specific scoring matrix is generated.
- This combination of steps produces a set of feature (GO annotation) derived profiles from which protein function is predicted
Keywords:
- gene ontology
- gene ontology annotation
- GO annotation
- functional annotation
- function annotation
- protein function
- protein functional annotation
- conserved residue
- conserved protein residue
Literature & Tutorials:
PubMed Link: ConFunc--functional annotation in the twilight zone
This record last updated: 01-10-2010