RNAplex -- RNA complex tool
What you can do:
Find information about RNA-RNA interaction.
Highlights:
- RNAplex is a tool designed to quickly find possible hybridization sites for a query RNA in large RNA databases.
- It uses a slightly different energy model which reduces the computational time by a factor 10-27 compared to RNAhybrid.
- A length penalty allows to focus the target search on short highly stable interactions.
Keywords:
- RNA-RNA interaction
- Regulatory RNA
- Transcriptional gene silencing
- siRNA
- miRNA
- snoRNA
- ncRNA
- RNA duplex
Literature & Tutorials:
PubMed Link: RNAplex: a fast tool for RNA-RNA interaction search
This record last updated: 04-17-2014