CGHnormaliter -- Array CGH normalizing package

URL:
http://bioconductor.org/packages/2.6/bioc/html/CGHnormaliter.html
What you can do:
Normalize array comparative genomic hybridization (aCGH) data.
Highlights:
  • CGHnormaliter is a Bioconductor package that uses an iterative procedure to eliminate the influence of imbalanced copy numbers.
  • This leads to a more reliable assessment of copy number alterations (CNAs).
  • CGHnormaliter is integrated in the Bioconductor environment allowing a smooth link to visualization tools and further data analysis.
  • The CGHnormaliter package is implemented in R.
Keywords:
  • R
  • copy number alteration
  • CNA
  • array comparative genomic hybridization
  • aCGH
  • Bioconductor
Literature & Tutorials:
PubMed Link: CGHnormaliter: a Bioconductor package for normalization of array CGH data with many CNAs
This record last updated: 05-27-2010
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