AREsite -- Au-Rich Elements database

URL:
http://rna.tbi.univie.ac.at/cgi-bin/AREsite.cgi
What you can do:
Find information about Au-Rich elements in vertebrate mRNA 3'-untranslated regions (UTRs).
Highlights:
  • AREsite allows to quantify the structuredness of ARE motif sites in terms of opening energies and accessibility probabilities.
  • It provides a detailed phylogenetic analysis of ARE motifs and incorporate information about experimentally validated targets of the ARE-binding proteins TTP, HuR and Auf1.
  • This online resource allows detailed investigation of these functional elements by analysis of the phylogentic conservation and the structural context these motifs are embedded in.
Keywords:
  • AU-rich element
  • mRNA 3'-untranslated regions
  • UTR
  • cis-acting regulatory element
  • ARE-binding protein
Literature & Tutorials:
PubMed Link: AREsite: a database for the comprehensive investigation of AU-rich elements.
This record last updated: 06-14-2011
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