RBPDB -- RNA-Binding Protein DataBase

What you can do:
Find information about specificities of proteins that bind to RNA.
  • The RNA-Binding Protein DataBase (RBPDB) is a collection of experimental observations of RNA-binding sites, both in vitro and in vivo, manually curated from primary literature.
  • To build RBPDB, a literature search was performed for experimental binding data for all RNA-binding proteins (RBPs) with known RNA-binding domains in four metazoan species (human, mouse, fly and worm).
  • In total, RPBDB contains binding data on 272 RBPs, including 71 that have motifs in position weight matrix format, and 36 sets of sequences of in vivo-bound transcripts from immunoprecipitation experiments.
  • The database is accessible by a web interface which allows browsing by domain or by organism, searching and export of records, and bulk data downloads.
  • Users can also use RBPDB to scan sequences for RBP-binding sites.
  • RNA-binding protein specificity
  • RNA-binding protein
  • RNA-binding protein site
  • RNA-binding site
  • homo sapiens
  • mus musculus
  • Drosophila melanogaster
  • RBP
Literature & Tutorials:
This record last updated: 06-14-2011
Report a missing or misdirected URL.

The Health Sciences Library System supports the Health Sciences at the University of Pittsburgh.

© 1996 - 2023 Health Sciences Library System, University of Pittsburgh. All rights reserved.