TFGD -- Tomato Functional Genomics Database

URL:

http://ted.bti.cornell.edu/

What you can do:

Find information about tomato genes.

Highlights:

TFGD provides a comprehensive resource to store, query, mine, analyze, visualize and integrate large-scale tomato functional genomics data sets.
The database includes metabolite profiles as well as large-scale tomato small RNA (sRNA) data sets.
Computational pipelines have been developed to process microarray, metabolite and sRNA data sets archived in the database, respectively, and TFGD provides downloads of all the analyzed results.
TFGD is also designed to enable users to easily retrieve biologically important information through a set of efficient query interfaces and analysis tools, including improved array probe annotations as well as tools to identify co-expressed genes, significantly affected biological processes and biochemical pathways from gene expression data sets and miRNA targets, and to integrate transcript and metabolite profiles, and sRNA and mRNA sequences.
The suite of tools and interfaces in TFGD allow intelligent data mining of recently released and continually expanding large-scale tomato functional genomics data sets.

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This record last updated: 06-14-2011