Design Southern Blotting Probes

What you can do:
Implementation of the automated pipeline for Southern Blot probe design, described by Croning et al.
Highlights:
  • This Tools is based on the 'Genes2Cognition'-developed method described by Croning et al, adapted to run outside a cluster computing facility and to support both human and mouse genomes.
  • The results from this pipeline are stored in a database which is NOT backed up.
  • So make sure you keep your own copy of the results.
  • Select Setup on the left to start an analysis.
  • Previous results are accessible by the 'Browse Results' link.
  • To make analysis possible without high-end computing power, some default values were adjusted.
  • Compare the original example output, available on the left under 'Example Output' with our analysis using default parameters on the same region, available under 'Browse Results' => Example.
Keywords:
  • PCR primers
  • oligos databases
  • design tools
  • Southern blot
  • probe
Literature & Tutorials:
PubMed Link:
This record last updated: 12-13-2012
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