General plant databases
Search and analyze functional genomics datasets in agricultural species.
Identify SNPs from assembled EST sequences for the crops rice, barley and Brassica.
Analyze and visualize plant microarray data.
Search for sequence, classification, clustering and annotation data of crop EST projects.
Search for sequence information on rice, maize and other cereal crops small RNAs.
Locate chromatin-associated proteins, including RNAi-associated proteins, for a broad range of organisms.
Search for information of plant gene expression in response to pathogens and environmental changes.
Search and visualize data for high-throughput functional analysis of Arabidopsis, rice, and other plant genomes.
An online resource documenting stress-responsive genes comparatively across plant species.
Software for visualization and analysis of genetic data.
Search for comprehensive and extensive information on various plant genomes generated by a German collaborative network of plant genomics research.
Predict gene structures of plant genomes.
Search for molecular and phenotypic information on wheat, barley, rye, triticale, and oats.
Curated resource for genetic, genomic and comparative genomics data for the major crop species, including rice, maize, wheat and many other plant (mainly grass) species.
Search for protein sequence-related information based on whole-genome analysis.
A database that summarizes diverse information about metabolic pathways in crop plants and allows automatic export of information for the creation of detailed metabolic models.
Find information about agricultural plant genetics and diseases.
Find information about protein phosphorylation in plants.
Search for clustered plant protein sequences available from SwissProt/TrEMBL.
A database of potential intron polymorphism markers in plants.
Search for documented motifs found in plant cis-acting regulatory DNA elements.
Search for information on plant protease inhibitors (PIs) and related genes.
Find information about plant lectin domains.
Find information about microRNA sequences and targets in plants.
Find information about microRNAs in plants.
Search a collection of visualized plant organelles and protocols for plant organelle research.
Search for information on putative orthologous proteins among rice, maize and Arabidopsis with emphasis on RNA-binding proteins.
Use to predict sites of RNA editing in plants.
Find information about genes involved in plant defense mechanisms.
Search for information on plant-pathogen interactions, signal transduction, and microarray gene expression during plant pathogenesis.
Conduct comparative genomic study of plants.
Search for gene expression data in model plants generated by MPSS (massively parallel signature sequencing) technology.
Search for comprehensive information on small nucleolar RNAs in plants.
Search for information on plant cis-acting regulatory elements, transcription sites, enhancers and repressors.
A genomics database encompassing sequence data for green plants (Viridiplantae).
Search for promoter sequences for RNA polymerase II with experimentally determined transcription start sites from various plant species.
A comprehensive plant transcription factor database.
A plant gene family database based on the inferred proteomes of five sequenced plant species: Arabidopsis thaliana, Carica papaya, Medicago truncatula, Oryza sativa and Populus trichocarpa.
Find information about transcription factors in plants.
Find information about plant microRNAs.
Perform systematic comparison of proteome data among species.
Search for information on adaptive evolution in gene families of higher plants and chordate.
Search for information on plant DNA C-values and genome sizes.
Search for information on plant kinases and phosphatases.
Search for genes and proteins involved in plant membrane transportation.
Identify, classify, and analyze repetitive sequences in plant genomes.
Search for plant EST and cDNA sequences from this comprehensive collection.
Search for genetic, molecular and phenotypic data of tropical crop species.
Search sequences and genomic information on crop plants.
Search for annotated information on plant expressed sequences tags (ESTs).