ProteinDBS -- A real-time retrieval system for protein structure comparison

URL:
http://proteindbs.rnet.missouri.edu/
What you can do:
Support protein global-to-global tertiary structure matching.
Highlights:
  • ProteinDBS is a web server designed for comparisons and searches of structurally similar proteins from a large-scale database.
  • It provides two comparison methods, global-to-global and local-to-local, to facilitate the searches of protein structures or substructures.
  • It supports query by PDB protein ID and by new structures uploaded by users.
  • ProteinDBS is a tool to investigate functional or evolutional relationships among proteins.
  • The common substructures identified by local comparison can be potentially used to assist the human curation process in discovering new domains or folds from the ever-growing protein structure databases.
Keywords:
  • protein structures
  • protein tertiary structures
  • global structures
  • protein structural similarity analysis
Literature & Tutorials:
PubMed Link: ProteinDBS
-- 2010 Update: ProteinDBS v2.0: a web server for global and local protein structure search
This record last updated: 07-16-2010
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