UTRdb and UTRsite -- Untranslated Regions databases

URL:
http://utrsite.ba.itb.cnr.it/ http://utrdb.ba.itb.cnr.it/
What you can do:
Search for the 5'- and 3'-untranslated regions (5'- and 3'-UTRs) of eukaryotic mRNAs.
Highlights:
  • UTRdb is a curated database of 5' and 3' untranslated sequences of eukaryotic mRNAs, derived from several sources of primary data.
  • Experimentally validated functional motifs are annotated and also collated at the UTRsite database where more specific information on the functional motifs and cross-links to interacting regulatory protein are provided.
  • In the current update, the UTR entries have been organized in a gene-centric structure to better visualize and retrieve 5' and 3'UTR variants generated by alternative initiation and termination of transcription and alternative splicing.
  • Experimentally validated miRNA targets and conserved sequence elements are also annotated.
Keywords:
  • untranslated regions
  • UTR
  • repetitive elements
  • eukaryotic mRNA
  • UTR repetitive elements
Literature & Tutorials:
PubMed Link: UTRdb and UTRsite
--2010 Update: UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs
This record last updated: 08-05-2020
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