DPInteract -- A comprehensive library of binding sites for E. coli DNA-binding proteins

What you can do:
Search for experimentally determined DNA binding proteins and their binding sites over the complete E. coli K12 genome.
Highlights:
  • Of the 240 candidate Escherichia coli DNA-binding proteins, about 55 have DNA-binding sites identified by DNA footprinting.
  • These sites were used to construct recognition matrices, which can be used to search for additional binding sites in the E. coli genomic sequence.
Keywords:
  • E. coli DNA-binding sites
  • DNA-binding proteins
  • Escherichia coli DNA-binding sites
  • E. coli K12 genome
Literature & Tutorials:
PubMed Link: DPInteract
This record last updated: 05-06-2005
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