EcoCyc -- Encyclopedia of Escherichia coli K-12 Genes and Metabolism
URL:
What you can do:
Search for comprehensive biological information on bacterium Escherichia coli K12 MG1655.
Highlights:
- EcoCyc integrates information about the genome, genes and gene products; the metabolic network; and the regulatory network of E. coli.
- Recent EcoCyc developments include a new initiative to represent and curate all types of E. coli regulatory processes such as attenuation and regulation by small RNAs.
- EcoCyc has started to curate Gene Ontology (GO) terms for E. coli and has made a dataset of E. coli GO terms available through the GO Web site.
- The curation and visualization of electron transfer processes has been significantly improved.
- Other software and Web site enhancements include the addition of tracks to the EcoCyc genome browser, in particular a type of track designed for the display of ChIP-chip datasets, and the development of a comparative genome browser.
- A new Genome Omics Viewer enables users to paint omics datasets onto the full E. coli genome for analysis.
- A new advanced query page guides users in interactively constructing complex database queries against EcoCyc.
- A Macintosh version of EcoCyc is now available.
- A series of Webinars is available to instruct users in the use of EcoCyc.
Keywords:
- Escherichia coli K12 MG1655 data warehouse
- Escherichia coli K12 data warehouse
- E. coli data warehouse
- E. coli genomic data warehouse
- E. coli literatures
- E. coli gene annotation
- E. coli genome
- E. coli proteome
Literature & Tutorials:
PubMed Link: EcoCyc
-- 2009 Update: EcoCyc: a comprehensive view of Escherichia coli biology
2011 Update: EcoCyc: a comprehensive database of Escherichia coli biology.
-- 2009 Update: EcoCyc: a comprehensive view of Escherichia coli biology
2011 Update: EcoCyc: a comprehensive database of Escherichia coli biology.
This record last updated: 02-18-2009