LGA -- a method for finding 3D similarities in protein structures
What you can do:
Compare protein structures or fragments of protein structures in sequence dependent and sequence independent modes.
Highlights:
- LGA (Local-Global Alignment) method is designed to facilitate the comparison of protein structures or fragments of protein structures in sequence dependent and sequence independent modes.
- Data generated by LGA can be successfully used in a scoring function to rank the level of similarity between two structures and to allow structure classification when many proteins are being analyzed.
- LGA also allows the clustering of similar fragments of protein structures.
Keywords:
- protein structural homology analysis tool
- protein structure comparison
- protein 3D structure comparison tool
- protein tertiary structure comparison
- protein structure alignment tool
- protein structure-structure alignment tool
Literature & Tutorials:
This record last updated: 04-24-2006