YMF -- a program for discovery of novel transcription factor binding sites by statistical over-representation
What you can do:
Identify good candidates for such transcription factor binding sites by searching for statistically overrepresented motifs.
Highlights:
- The program YMF identifies good candidates for such binding sites by searching for statistically overrepresented motifs.
- More specifically, YMF enumerates all motifs in the search space and is guaranteed to produce those motifs with greatest z-scores.
Keywords:
- transcription factor binding site analysis tool
- DNA-binding sites prediction tool
- promoter analysis tool
- transcription starting site prediction tool
- TSS prediction tool
- Transcription Initiation Site prediction tool
- TSS positions
- transcription factor binding sites
- transcription factor binding site visualization tool
- transcription factors
- cis-elements
- cis-elements prediction tool
- regulatory element prediction tool
- promoter element prediction tool
Literature & Tutorials:
This record last updated: 06-14-2005