AMIGene -- Annotation of MIcrobial Genes
What you can do:
Automatically identify the most likely coding sequences (CDSs) in a large contig or a complete bacterial genome sequence.
Highlights:
- The first step in AMIGene is dedicated to the construction of Markov models that fit the input genomic data (i.e. the gene model), followed by the combination of well-known gene-finding methods and an heuristic approach for the selection of the most likely CDSs.
- The web interface allows the user to select one or several gene models applied to the analysis of the input sequence by the
- AMIGene program and to visualize the list of predicted CDSs graphically and in a downloadable text format.
Keywords:
- gene prediction tool
- gene discovery tool
- bacterial gene prediction tool
- coding sequence prediction tool
- bacterial genomes
Literature & Tutorials:
PubMed Link: AMIGene -- Annotation of MIcrobial Genes
This record last updated: 06-16-2005