AS2TS system for protein structure modeling and analysis
What you can do:
Perform homology-based protein structure analysis and modeling.
Highlights:
- This web-based system is designed to facilitate protein structure comparison and protein structure modeling efforts.
- The protein structure analysis and comparison services use the LGA (local-global alignment) program to search for regions of local similarity and to evaluate the level of structural similarity between compared protein structures.
- To facilitate the homology-based protein structure modeling process, the AL2TS service translates given sequence-structure alignment data into the standard Protein Data Bank (PDB) atom records (coordinates).
- For a given sequence of amino acids, the AS2TS (amino acid sequence to tertiary structure) system calculates (e.g. using PSI-BLAST PDB analysis) a list of the closest proteins from the PDB, and then a set of draft 3D models is automatically created.
Keywords:
- protein structure analysis tool
- protein sequence to structure
- protein sequence-structure alignment
- protein structure modeling tool
- protein structure comparison tool
- protein homology analysis tool
Literature & Tutorials:
This record last updated: 04-17-2014