ArchPRED -- a template based loop structure prediction server
What you can do:
Predict protein loop structure.
Highlights:
- ArchPRED server implements a novel fragment-search based method for predicting loop conformations.
- The inputs to the server are the atomic coordinates of the query protein and the position of the loop.
- The algorithm selects candidate loop fragments from a regularly updated loop library (Search Space) by matching the length, the types of bracing secondary structures of the query and by satisfying the geometrical restraints imposed by the stem residues.
Keywords:
- protein loop prediction tool
- protein secondary structure analysis tool
Literature & Tutorials:
This record last updated: 07-20-2006