TACT -- Transcriptome Auto-annotation Conducting Tool of H-InvDB
What you can do:
Conduct functional annotation of mRNA transcripts.
Highlights:
- Transcriptome Auto-annotation Conducting Tool (TACT) is a web-based automated tool for conducting functional annotation of transcripts by the integration of sequence similarity searches and functional motif predictions.
- It integrates two kinds of similarity searches, FASTY and BLASTX, against protein sequence databases, UniProtKB (Swiss-Prot/TrEMBL) and RefSeq, and a unified motif prediction program, InterProScan, into the ORF-prediction pipeline.
- TACT system is useful for functional annotation and that the prediction of ORFs and protein functions is highly accurate and close to the results of human curation.
Keywords:
- gene prediction tool
- open reading frame (ORFs) prediction tool
- gene annotation tool
- gene function prediction tool
- mRNA transcripts annotation tool
- DNA sequence similarity search tool
- sequence motif prediction tool
Literature & Tutorials:
This record last updated: 04-21-2014