MAGIIC-PRO -- detecting functional signatures by efficient discovery of long patterns in protein sequences

URL:
http://biominer.bime.ntu.edu.tw/magiicpro/
What you can do:
Discover long patterns in protein sequences.
Highlights:
  • MAGIIC-PRO aims to discover functional signatures of a query protein by sequential pattern mining.
  • It employs a novel combination of intra- and inter-block gap constraints to discover functional long motifs that are interleaved by several large irregular gaps.
  • The users can be directly guided to the patterns with as many blocks as that are conserved simultaneously.
Keywords:
  • protein sequence analysis tool
  • protein motif prediction tool
  • long protein sequence pattern identification tool
Literature & Tutorials:
PubMed Link: MAGIIC-PRO -- detecting functional signatures by efficient discovery of long patterns in protein sequences
This record last updated: 07-26-2006
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