CFGP -- the Comparative Fungal Genomics Platform
What you can do:
Find information about the genomes of over 80 fungal species.
Highlights:
- The CFGP comprises three layers, including the basal layer, middleware and the user interface.
- The data warehouse in the basal layer contains standardized genome sequences of 65 fungal species.
- The middleware processes queries via six analysis tools, including BLAST, ClustalW, InterProScan, SignalP 3.0, PSORT II and a newly developed tool named BLASTMatrix. The BLASTMatrix permits the identification and visualization of genes homologous to a query across multiple species.
- The Data-driven User Interface (DUI) of the CFGP was built on a new concept of pre-collecting data and post-executing analysis instead of the 'fill-in-the-form-and-press-SUBMIT' user interfaces utilized by most bioinformatics sites. A tool termed Favorite, which supports the management of encapsulated sequence data and provides a personalized data repository to users, is another novel feature in the DUI.
Keywords:
- Fungal DNA
- Fungal Proteins
- Fungal Genome
- Nucleic Acid Sequence Homology
- fungus
Literature & Tutorials:
This record last updated: 04-17-2008