PFplus -- Patch Finder Plus

What you can do:
A web server for extracting and displaying positive electrostatic patches on protein surfaces.
Highlights:
  • The input required for PFplus is either a four letter PDB code or a protein coordinate file in PDB format, provided by the user.
  • PFplus computes the continuum electrostatics potential and extracts the largest positive patch for each protein chain in the PDB file.
  • The server provides an output file in PDB format including a list of the patch residues.
  • In addition, the largest positive patch is displayed on the server by a graphical viewer (Jmol), using a simple color coding.
Keywords:
  • Electrostatics
  • Hydrogen-Ion Concentration
  • Molecular Conformation
  • Surface Properties
  • electrostatic patches
  • protein surfaces
  • patch residues
This record last updated: 06-03-2008
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