PlasmoGF -- an integrated system for comparative genomics and phylogenetic analysis of Plasmodium gene families

URL:
http://bioinformatics.zj.cn/pgf/
What you can do:
Analyze the protozoan parasite that causes malaria.
Highlights:
  • Gene families are clustered using the Markov Cluster algorithm implemented in TribeMCL program and could be searched using keywords, gene-family information, domain composition, Gene Ontology and BLAST.
  • Includes bioinformatics tools to facilitate the analysis of these putative Plasmodium gene families, including gene retrieval, annotation, sequence alignment, phylogeny construction and visualization.
  • PlasmoGF contained 8980 sets of gene families derived from six malaria parasite genomes: Plasmodium. falciparum, P. berghei, P. knowlesi, P. chabaudi, P. vivax and P. yoelii.
Keywords:
  • Plasmodium
  • malaria
  • protozoan
  • protozoa
  • parasite
Literature & Tutorials:
PubMed Link: PlasmoGF: an integrated system for comparative genomics and phylogenetic analysis of Plasmodium gene families
This record last updated: 09-10-2008
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