EchoLOCATION -- an analysis of subcellular location for E.coli proteins
What you can do:
An in silico analysis of the subcellular locations of Escherichia coli proteins and comparison with experimentally derived locations.
Highlights:
- EchoLOCATION is a database that provides a comprehensive analysis of the subcellular locations of E. coli K-12 proteins.
- Locations are predicted by integrating data from a range of publicly available algorithms combined with extensive curation of experimental literature.
- The data can be searched in a variety of ways and can generate lists of subcellular proteomes for analysis.
- Experimental evidence supports the locations of over 500 envelope proteins (periplasm, inner and outer membrane).
- From analysis of disagreements between in silico predictions and experimental data we provide an analysis of protein types where subcellular prediction algorithms are currently not accurate.
Keywords:
- E. coli
- Escherichia coli
- subcellular
Literature & Tutorials:
This record last updated: 11-24-2008