CONSORF -- a consensus prediction system for prokaryotic coding sequences
What you can do:
An automatic identification and updating system that provides comprehensive prokaryotic CDS information.
Highlights:
- CONSORF first predicts the CDSs supported by consensus alignments.
- The alignments are derived from multiple genome-to-proteome comparisons with other prokaryotes using the FASTX program.
- Then, it fills the empty genomic regions with the CDSs supported by consensus ab initio predictions.
- From those consensus results, CONSORF provides prediction reliability scores, predicted frame-shifts, alternative start sites and best pair-wise match information against other prokaryotes.
Keywords:
- Prokaryote
- Prokaryotic Coding Sequence
- CDS
- Consensus Prediction
Literature & Tutorials:
This record last updated: 12-3-2008