SAM-T08 -- HMM-based Protein Structure Prediction
What you can do:
Use to predict 3D protein structure.
Highlights:
- The SAM-T08 web server is a protein structure prediction server that provides several useful intermediate results in addition to the final predicted 3D structure: three multiple sequence alignments of putative homologs using different iterated search procedures, prediction of local structure features including various backbone and burial properties, calibrated E-values for the significance of template searches of PDB and residue-residue contact predictions.
- The server has been validated as part of the CASP8 assessment of structure prediction as having good performance across all classes of predictions.
Keywords:
- protein structure prediction
- multiple sequence alignment
- protein homolog
- tertiary structure
Literature & Tutorials:
PubMed Link: SAM-T08, HMM-based protein structure prediction
This record last updated: 08-14-2009