phiSITE -- database of gene regulation in bacteriophages

URL:
http://www.phisite.org/main/
What you can do:
Find information about gene regulation in bacteriophages, the viruses that infect bacteria.
Highlights:
  • phiSITE is database of gene regulation in bacteriophages.
  • It contains detailed information about more than 700 experimentally confirmed or predicted regulatory elements (promoters, operators, terminators and attachment sites) from 32 bacteriophages belonging to Siphoviridae, Myoviridae and Podoviridae families.
  • The database is manually curated, the data are collected mainly form scientific papers, cross-referenced with other database resources (EMBL, UniProt, NCBI taxonomy database, NCBI Genome, ICTVdb, PubMed Central) and stored in SQL based database system.
  • The system provides full text search for regulatory elements, graphical visualization of phage genomes and several export options. In addition, visualizations of gene regulatory networks for five phages (Bacillus phage GA-1, Enterobacteria phage lambda, Enterobacteria phage Mu, Enterobacteria phage P2 and Mycoplasma phage P1) have been defined and made available.
Keywords:
  • bacteriophage
  • Bacillus phage GA-1
  • Enterobacteria phage lambda
  • Enterobacteria phage Mu
  • Enterobacteria phage P2
  • Mycoplasma phage P1
  • bacteriophage regulatory network
  • Siphoviridae
  • Myoviridae
  • Podoviridae
Literature & Tutorials:
PubMed Link: phiSITE: database of gene regulation in bacteriophages
This record last updated: 02-11-2010
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