miRGator -- microRNA Functional Annotation System
What you can do:
Find information about microRNAs.
Highlights:
- miRGator is an integrated database of microRNA (miRNA)-associated gene expression, target prediction, disease association and genomic annotation, which aims to facilitate functional investigation of miRNAs.
- The recent version of miRGator v2.0 contains information about (i) human miRNA expression profiles under various experimental conditions, (ii) paired expression profiles of both mRNAs and miRNAs, (iii) gene expression profiles under miRNA-perturbation (e.g. miRNA knockout and overexpression), (iv) known/predicted miRNA targets and (v) miRNA-disease associations. In total, >8000 miRNA expression profiles, ∼300 miRNA-perturbed gene expression profiles and ∼2000 mRNA expression profiles are compiled with manually curated annotations on disease, tissue type and perturbation.
- By integrating these data sets, a series of novel associations (miRNA-miRNA, miRNA-disease and miRNA-target) is extracted via shared features.
- Complex associations are readily accessible using an interactive network visualization interface.
Keywords:
- microRNA
- mRNA
- microRNA protein
- miRNA-perturbation
- miRNA
- miRNA interaction
- miRNA association
Literature & Tutorials:
This record last updated: 06-14-2011